I have a Task Group of 8 GE's that I normally give the orders:
1. Survey Nearest Body
2. If fuel less than 30% then refuel
3. If Supply less than 20% then resupply
I will then have them move to a system and on the entry gate do 'Transit and Divide' which works great - they go off as individual sub fleets and do their thing.
Now, the problem occurred when I got into a very large system with a million-and-one asteroids spread over what I think is 50billion KM square of space. I didn't have any tankers at this point of the game so they had to head back to Earth to refuel - running out of fuel before they even got to the exit gate. So, I managed to do some manual fuel transfer and got them all back to Earth whilst building some supply ships (flagged as both Tanker and Supply).
The next go at surveying the system ended the same, although this time I had the supply ship on hand to help. To stop the fuel warnings and the sub-pulse stops I removed any affected sub-fleet's orders. As they were being refueled I would move a sub-fleet to one of 4 waypoints setup in the outer asteroid belt and once they were all ready I went into the head fleet and gave it the orders noted above. I then checked to incl default orders and conditional orders and hit 'copy'.
1. The copy command needs there to be an actual order in the list - so I couldn't copy the default and conditional orders.
2. I gave the head fleet an order to activate transponder but to do so I had to click on a location which meant that it then headed off to the planet I had picked before it would turn on it's transponder.
3. the primary default order copied fine, as did the 1st conditional order. But, the 2nd conditional order did not copy correctly. The check should have been 'supply less than 20%' but it was set to 'no condition' and the action should have been 'resupply at nearest colony or supply ship' but it was set to '
refuel at nearest colony or supply ship'
tldr: the 'copy commands' button has a couple of issues